Publications (reverse chronological order)

Flexible data integration and curation using a graph-based approach

Samuel Croset, Joachim Rupp, Martin Romacker

Nov. 2015 - Bioinformatics


Drug repositioning and indication discovery using description logics

Samuel Croset

Oct. 2014 - University of Cambridge


A document classifier for medicinal chemistry publications trained on the ChEMBL corpus

George Papadatos, Gerard JP van Westen, Samuel Croset, Rita Santos, Simone Trubian, John P Overington

Aug. 2014 - Journal of Cheminformatics


An ontology for drug-drug interactions

Maria Herrero-Zazo, Janna Hastings, Isabel Segura-Bedmar, Samuel Croset, Paloma Martinez, Christoph Steinbeck

Oct. 2013 - Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences 2013


A case study: semantic integration of gene–disease associations for type 2 diabetes mellitus from literature and biomedical data resources

Dietrich Rebholz-Schuhmann, Christoph Grabmüller, Silvestras Kavaliauskas, Samuel Croset, Peter Woollard, Rolf Backofen, Wendy Filsell, Dominic Clark

Nov. 2013 - Drug discovery today


The functional therapeutic chemical classification system

Samuel Croset, John P Overington, Dietrich Rebholz-Schuhmann

Oct. 2013 - Bioinformatics


Brain, a library for the OWL2 EL profile

Samuel Croset, John P Overington, Dietrich Rebholz-Schuhmann

Jun. 2013 - Proceedings of OWL, Experiences and Directions Workshop 2013


Brain: biomedical knowledge manipulation

Samuel Croset, John P Overington, Dietrich Rebholz-Schuhmann

May. 2013 - Bioinformatics


Integration of the Anatomical Therapeutic Chemical Classification System and DrugBank using OWL and text-mining

Samuel Croset, Robert Hoehndorf, Dietrich Rebholz-Schuhmann

Sep. 2012 - Proceedings of the 2012 Workshop on ontologies in biomedicine and life sciences


Finding small molecule and protein pairs in scientific literature using a bootstrapping method

Ying Yan, Jee-Hyub Kim, Samuel Croset, Dietrich Rebholz-Schuhmann

Jun. 2012 - Proceedings of the 2012 Workshop on Biomedical Natural Language Processing


OWL Representation of Drug Activities on Biological Systems

Samuel Croset

Jun. 2012 - Proceedings of the International Conference on Biomedical Ontologies 2012


Argumentation to Represent and Reason over Biological Systems

Adam Wyner, Luke Riley, Robert Hoehndorf, Samuel Croset

Jan. 2012 - Proceedings of the Information Technology in Bio-and Medical Informatics conference 2012


Exploring the Generation and Integration of Publishable Scientific Facts Using the Concept of Nano-publications

Samuel Croset, Amanda Clare, Christoph Grabmueller, Senay Kafkas, Maria Liakata, Anika Oellrich and Dietrich Rebholz-Schuhmann

May. 2011 - Proceedings of the 1st Workshop on Semantic Publishing 2011


The CALBC RDF Triple store: retrieval over large literature content

Samuel Croset, Christoph Grabmueller, Chen Li, Silverstras Kavialauskas and Dietrich Rebholz-Schuhmann

Dec. 2010 - Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences 2010